Publications

HDX Workbench is hands down the most cited analysis software in the field, including eighteen Nature publications. Below is a list of publications that cite our software or its derivative work, so look at all of the scientific stories below and see what you can do with HDX Workbench!

  • Petrie, E., Sandow, J., Jacobsen, A., Smith, B., Griffin, M., Lucet, I., Dai, W., Young, S., Tanzer, M., Wardak, A., & others. (2018). Conformational switching of the pseudokinase domain promotes human mlkl tetramerization and cell death by necroptosis.. Nature communications, 9(1), 2422–2422.
    [Bibtex]
    @article{petrie2018conformational,
    title={Conformational switching of the pseudokinase domain promotes human MLKL tetramerization and cell death by necroptosis.},
    author={Petrie, EJ and Sandow, JJ and Jacobsen, AV and Smith, BJ and Griffin, MDW and Lucet, IS and Dai, W and Young, SN and Tanzer, MC and Wardak, A and others},
    journal={Nature communications},
    volume={9},
    number={1},
    pages={2422--2422},
    year={2018}
    }
  • de Vera, I. M. S., Munoz-Tello, P., Dharmarajan, V., Marciano, D. P., Matta-Camacho, E., Giri, P. K., Shang, J., Hughes, T. S., Rance, M., Griffin, P. R., & others. (2018). Defining a canonical ligand-binding pocket in the orphan nuclear receptor nurr1. Biorxiv, 278440.
    [Bibtex]
    @article{de2018defining,
    title={Defining a canonical ligand-binding pocket in the orphan nuclear receptor Nurr1},
    author={de Vera, Ian Mitchelle S and Munoz-Tello, Paola and Dharmarajan, Venkatasubramanian and Marciano, David P and Matta-Camacho, Edna and Giri, Pankaj Kumar and Shang, Jinsai and Hughes, Travis S and Rance, Mark and Griffin, Patrick R and others},
    journal={bioRxiv},
    pages={278440},
    year={2018},
    publisher={Cold Spring Harbor Laboratory}
    }
  • Johnson, B., VanBlargan, L. A., Xu, W., White, J. P., Shan, C., Shi, P., Zhang, R., Adhikari, J., Gross, M. L., Leung, D. W., & others. (2018). Human ifit3 modulates ifit1 rna binding specificity and protein stability. Immunity, 48(3), 487–499.
    [Bibtex]
    @article{johnson2018human,
    title={Human IFIT3 modulates IFIT1 RNA binding specificity and protein stability},
    author={Johnson, Britney and VanBlargan, Laura A and Xu, Wei and White, James P and Shan, Chao and Shi, Pei-Yong and Zhang, Rong and Adhikari, Jagat and Gross, Michael L and Leung, Daisy W and others},
    journal={Immunity},
    volume={48},
    number={3},
    pages={487--499},
    year={2018},
    publisher={Elsevier}
    }
  • Woodcock, J. M., Goodwin, K. L., Sandow, J. J., Coolen, C., Perugini, M. A., Webb, A. I., Pitson, S. M., Lopez, A. F., & Carver, J. A.. (2018). Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, n-terminal $\alpha$-helical order, and molecular chaperone activity. Journal of biological chemistry, 293(1), 89–99.
    [Bibtex]
    @article{woodcock2018role,
    title={Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, N-terminal $\alpha$-helical order, and molecular chaperone activity},
    author={Woodcock, Joanna M and Goodwin, Katy L and Sandow, Jarrod J and Coolen, Carl and Perugini, Matthew A and Webb, Andrew I and Pitson, Stuart M and Lopez, Angel F and Carver, John A},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={1},
    pages={89--99},
    year={2018},
    publisher={ASBMB}
    }
  • Fernandez, E., Kose, N., Edeling, M. A., Adhikari, J., Sapparapu, G., Lazarte, S. M., Nelson, C. A., Govero, J., Gross, M. L., Fremont, D. H., & others. (2018). Mouse and human monoclonal antibodies protect against infection by multiple genotypes of japanese encephalitis virus. Mbio, 9(1), e00008–18.
    [Bibtex]
    @article{fernandez2018mouse,
    title={Mouse and Human Monoclonal Antibodies Protect against Infection by Multiple Genotypes of Japanese Encephalitis Virus},
    author={Fernandez, Estefania and Kose, Nurgun and Edeling, Melissa A and Adhikari, Jagat and Sapparapu, Gopal and Lazarte, Susana M and Nelson, Christopher A and Govero, Jennifer and Gross, Michael L and Fremont, Daved H and others},
    journal={mBio},
    volume={9},
    number={1},
    pages={e00008--18},
    year={2018},
    publisher={Am Soc Microbiol}
    }
  • Offenbacher, A. R., Iavarone, A. T., & Klinman, J. P.. (2018). Hydrogen–deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase. Journal of biological chemistry, 293(4), 1138–1148.
    [Bibtex]
    @article{offenbacher2018hydrogen,
    title={Hydrogen--deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase},
    author={Offenbacher, Adam R and Iavarone, Anthony T and Klinman, Judith P},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={4},
    pages={1138--1148},
    year={2018},
    publisher={ASBMB}
    }
  • Hamuro, Y., & Coales, S. J.. (2018). Optimization of feasibility stage for hydrogen/deuterium exchange mass spectrometry. Journal of the american society for mass spectrometry, 1–7.
    [Bibtex]
    @article{hamuro2018optimization,
    title={Optimization of Feasibility Stage for Hydrogen/Deuterium Exchange Mass Spectrometry},
    author={Hamuro, Yoshitomo and Coales, Stephen J},
    journal={Journal of The American Society for Mass Spectrometry},
    pages={1--7},
    year={2018},
    publisher={Springer}
    }
  • Evans, P. R., Gerber, K. J., Dammer, E. B., Duong, D. M., Goswami, D., Lustberg, D. J., Zou, J., Yang, J. J., Dudek, S. M., Griffin, P. R., & others. (2018). Interactome analysis reveals regulator of g protein signaling 14 (rgs14) is a novel calmodulin (cam) effector in mouse brain. Biorxiv, 247270.
    [Bibtex]
    @article{evans2018interactome,
    title={Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calmodulin (CaM) Effector in Mouse Brain},
    author={Evans, Paul R and Gerber, Kyle J and Dammer, Eric B and Duong, Duc M and Goswami, Devrishi and Lustberg, Daniel J and Zou, Juan and Yang, Jenny J and Dudek, Serena M and Griffin, Patrick R and others},
    journal={bioRxiv},
    pages={247270},
    year={2018},
    publisher={Cold Spring Harbor Laboratory}
    }
  • Hanson, Q. M., Carley, J. R., Gilbreath, T. J., Smith, B. C., & Underbakke, E. S.. (2018). Calmodulin-induced conformational control and allostery underlying neuronal nitric oxide synthase activation. Journal of molecular biology, 430(7), 935–947.
    [Bibtex]
    @article{hanson2018calmodulin,
    title={Calmodulin-induced Conformational Control and Allostery Underlying Neuronal Nitric Oxide Synthase Activation},
    author={Hanson, Quinlin M and Carley, Jeffrey R and Gilbreath, Tyler J and Smith, Brian C and Underbakke, Eric S},
    journal={Journal of molecular biology},
    volume={430},
    number={7},
    pages={935--947},
    year={2018},
    publisher={Elsevier}
    }
  • Guo, Y., Iavarone, A. T., Cooper, M. M., & Marletta, M. A.. (2018). Mapping the h-nox/hk binding interface in vibrio cholerae by hydrogen/deuterium exchange mass spectrometry. Biochemistry, 57(11), 1779–1789.
    [Bibtex]
    @article{guo2018mapping,
    title={Mapping the H-NOX/HK binding interface in Vibrio cholerae by hydrogen/deuterium exchange mass spectrometry},
    author={Guo, Yirui and Iavarone, Anthony T and Cooper, Matthew M and Marletta, Michael A},
    journal={Biochemistry},
    volume={57},
    number={11},
    pages={1779--1789},
    year={2018},
    publisher={ACS Publications}
    }
  • Kurumbail, R. G., West, G. M., Dharmarajan, V., Borzilleri, K. A., Withka, J. M., Ward, J., Reyes, A. R., Rajamohan, F., Griffin, P. R., & Calabrese, M. F.. (2018). Biophysical interactions of direct ampk activators. In Ampk (pp. 29–55). Springer.
    [Bibtex]
    @incollection{kurumbail2018biophysical,
    title={Biophysical Interactions of Direct AMPK Activators},
    author={Kurumbail, Ravi G and West, Graham M and Dharmarajan, Venkatasubramanian and Borzilleri, Kris A and Withka, Jane M and Ward, Jessica and Reyes, Allan R and Rajamohan, Francis and Griffin, Patrick R and Calabrese, Matthew F},
    booktitle={AMPK},
    pages={29--55},
    year={2018},
    publisher={Springer}
    }
  • Tyukhtenko, S., Rajarshi, G., Karageorgos, I., Zvonok, N., Gallagher, E. S., Huang, H., Vemuri, K., Hudgens, J. W., Ma, X., Nasr, M. L., & others. (2018). Effects of distal mutations on the structure, dynamics and catalysis of human monoacylglycerol lipase. Scientific reports, 8(1), 1719.
    [Bibtex]
    @article{tyukhtenko2018effects,
    title={Effects of Distal Mutations on the Structure, Dynamics and Catalysis of Human Monoacylglycerol Lipase},
    author={Tyukhtenko, Sergiy and Rajarshi, Girija and Karageorgos, Ioannis and Zvonok, Nikolai and Gallagher, Elyssia S and Huang, Hongwei and Vemuri, Kiran and Hudgens, Jeffrey W and Ma, Xiaoyu and Nasr, Mahmoud L and others},
    journal={Scientific reports},
    volume={8},
    number={1},
    pages={1719},
    year={2018},
    publisher={Nature Publishing Group}
    }
  • Evans, P. R., Gerber, K. J., Dammer, E. B., Duong, D. M., Goswami, D., Lustberg, D. J., Zou, J., Yang, J. J., Dudek, S. M., Griffin, P. R., & others. (2018). Interactome analysis reveals regulator of g protein signaling 14 (rgs14) is a novel calcium/calmodulin (ca2+/cam) and cam kinase ii (camkii) binding partner. Journal of proteome research, 17(4), 1700–1711.
    [Bibtex]
    @article{evans2018interactome,
    title={Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca2+/CaM) and CaM Kinase II (CaMKII) Binding Partner},
    author={Evans, Paul R and Gerber, Kyle J and Dammer, Eric B and Duong, Duc M and Goswami, Devrishi and Lustberg, Daniel J and Zou, Juan and Yang, Jenny J and Dudek, Serena M and Griffin, Patrick R and others},
    journal={Journal of proteome research},
    volume={17},
    number={4},
    pages={1700--1711},
    year={2018},
    publisher={ACS Publications}
    }
  • Oganesyan, I., Lento, C., & Wilson, D. J.. (2018). Contemporary hydrogen deuterium exchange mass spectrometry. Methods.
    [Bibtex]
    @article{oganesyan2018contemporary,
    title={Contemporary Hydrogen Deuterium Exchange Mass Spectrometry},
    author={Oganesyan, Irina and Lento, Cristina and Wilson, Derek J},
    journal={Methods},
    year={2018},
    publisher={Elsevier}
    }
  • Xiao, K., Zhao, Y., Choi, M., Liu, H., Blanc, A., Qian, J., Cahill III, T. J., Li, X., Xiao, Y., Clark, L. J., & others. (2018). Revealing the architecture of protein complexes by an orthogonal approach combining hdxms, cxms, and disulfide trapping. Nature protocols, 13(6), 1403.
    [Bibtex]
    @article{xiao2018revealing,
    title={Revealing the architecture of protein complexes by an orthogonal approach combining HDXMS, CXMS, and disulfide trapping},
    author={Xiao, Kunhong and Zhao, Yang and Choi, Minjung and Liu, Hongda and Blanc, Adi and Qian, Jiang and Cahill III, Thomas J and Li, Xue and Xiao, Yunfang and Clark, Lisa J and others},
    journal={Nature protocols},
    volume={13},
    number={6},
    pages={1403},
    year={2018},
    publisher={Nature Publishing Group}
    }
  • Birch, J., Axford, D., Foadi, J., Meyer, A., Eckardt, A., Thielmann, Y., & Moraes, I.. (2018). The fine art of integral membrane protein crystallisation. Methods.
    [Bibtex]
    @article{birch2018fine,
    title={The fine art of integral membrane protein crystallisation},
    author={Birch, James and Axford, Danny and Foadi, James and Meyer, Arne and Eckardt, Annette and Thielmann, Yvonne and Moraes, Isabel},
    journal={Methods},
    year={2018},
    publisher={Elsevier}
    }
  • Xu, G., Stupak, J., Yang, L., Hu, L., Guo, B., & Li, J.. (2018). Deconvolution in mass spectrometry-based proteomics. Rapid communications in mass spectrometry.
    [Bibtex]
    @article{xu2018deconvolution,
    title={Deconvolution in mass spectrometry-based proteomics},
    author={Xu, Guang and Stupak, Jacek and Yang, Li and Hu, Luokai and Guo, Bo and Li, Jianjun},
    journal={Rapid Communications in Mass Spectrometry},
    year={2018},
    publisher={Wiley Online Library}
    }
  • Johnson, B., McConnell, P., Kozlov, A. G., Mekel, M., Lohman, T. M., Gross, M. L., Amarasinghe, G. K., & Cooper, J. A.. (2018). Allosteric coupling of carmil and v-1 binding to capping protein revealed by hydrogen-deuterium exchange. Cell reports, 23(9), 2795–2804.
    [Bibtex]
    @article{johnson2018allosteric,
    title={Allosteric Coupling of CARMIL and V-1 Binding to Capping Protein Revealed by Hydrogen-Deuterium Exchange},
    author={Johnson, Britney and McConnell, Patrick and Kozlov, Alex G and Mekel, Marlene and Lohman, Timothy M and Gross, Michael L and Amarasinghe, Gaya K and Cooper, John A},
    journal={Cell reports},
    volume={23},
    number={9},
    pages={2795--2804},
    year={2018},
    publisher={Elsevier}
    }
  • Huang, R. Y-C., O’Neil, S. R., Lipovšek, D., & Chen, G.. (2018). Conformational assessment of adnectin and adnectin-drug conjugate by hydrogen/deuterium exchange mass spectrometry. Journal of the american society for mass spectrometry, 1–8.
    [Bibtex]
    @article{huang2018conformational,
    title={Conformational Assessment of Adnectin and Adnectin-Drug Conjugate by Hydrogen/Deuterium Exchange Mass Spectrometry},
    author={Huang, Richard Y-C and O’Neil, Steven R and Lipov{\v{s}}ek, Da{\v{s}}a and Chen, Guodong},
    journal={Journal of The American Society for Mass Spectrometry},
    pages={1--8},
    year={2018},
    publisher={Springer}
    }
  • Fanning, S. W., Jeselsohn, R., Dharmarajan, V., Mayne, C. G., Karimi, M., Buchwalter, G., Houtman, R., Toy, W., Fowler, C. E., Laine, M., & others. (2018). The serm/serd bazedoxifene disrupts esr1 helix 12 to overcome acquired hormone resistance in breast cancer cells. Biorxiv, 306472.
    [Bibtex]
    @article{fanning2018serm,
    title={The SERM/SERD Bazedoxifene Disrupts ESR1 Helix 12 to Overcome Acquired Hormone Resistance in Breast Cancer Cells},
    author={Fanning, Sean W and Jeselsohn, Rinath and Dharmarajan, Venkatasubramanian and Mayne, Christopher G and Karimi, Mostafa and Buchwalter, Gilles and Houtman, Ren{\'e} and Toy, Weiyi and Fowler, Colin E and Laine, Muriel and others},
    journal={bioRxiv},
    pages={306472},
    year={2018},
    publisher={Cold Spring Harbor Laboratory}
    }
  • Goswami, D., Zhang, J., Bondarenko, P. V., & Zhang, Z.. (2018). Ms-based conformation analysis of recombinant proteins in design, optimization and development of biopharmaceuticals. Methods.
    [Bibtex]
    @article{goswami2018ms,
    title={MS-based conformation analysis of recombinant proteins in design, optimization and development of biopharmaceuticals},
    author={Goswami, Devrishi and Zhang, Jun and Bondarenko, Pavel V and Zhang, Zhongqi},
    journal={Methods},
    year={2018},
    publisher={Elsevier}
    }
  • Chinthalapudi, K., Mandati, V., Zheng, J., Sharff, A. J., Bricogne, G., Griffin, P. R., Kissil, J., & Izard, T.. (2018). Lipid binding promotes the open conformation and tumor-suppressive activity of neurofibromin 2. Nature communications, 9(1), 1338.
    [Bibtex]
    @article{chinthalapudi2018lipid,
    title={Lipid binding promotes the open conformation and tumor-suppressive activity of neurofibromin 2},
    author={Chinthalapudi, Krishna and Mandati, Vinay and Zheng, Jie and Sharff, Andrew J and Bricogne, Gerard and Griffin, Patrick R and Kissil, Joseph and Izard, Tina},
    journal={Nature communications},
    volume={9},
    number={1},
    pages={1338},
    year={2018},
    publisher={Nature Publishing Group}
    }
  • Cherian, M. T., Chai, S. C., Wright, W. C., Singh, A., Casal, M. A., Zheng, J., Wu, J., Lee, R. E., Griffin, P. R., & Chen, T.. (2018). Cinpa1 binds directly to constitutive androstane receptor and inhibits its activity. Biochemical pharmacology, 152, 211–223.
    [Bibtex]
    @article{cherian2018cinpa1,
    title={CINPA1 binds directly to constitutive androstane receptor and inhibits its activity},
    author={Cherian, Milu T and Chai, Sergio C and Wright, William C and Singh, Aman and Casal, Morgan Alexandra and Zheng, Jie and Wu, Jing and Lee, Richard E and Griffin, Patrick R and Chen, Taosheng},
    journal={Biochemical pharmacology},
    volume={152},
    pages={211--223},
    year={2018},
    publisher={Elsevier}
    }
  • Pal, K., Bandyopadhyay, A., Zhou, E. X., Xu, Q., Marciano, D. P., Brunzelle, J. S., Yerrum, S., Griffin, P. R., Woude, G. V., Melcher, K., & others. (2017). Structural basis of tpr-mediated oligomerization and activation of oncogenic fusion kinases. Structure, 25(6), 867–877.
    [Bibtex]
    @article{pal2017structural,
    title={Structural Basis of TPR-Mediated Oligomerization and Activation of Oncogenic Fusion Kinases},
    author={Pal, Kuntal and Bandyopadhyay, Abhishek and Zhou, X Edward and Xu, Qingping and Marciano, David P and Brunzelle, Joseph S and Yerrum, Smitha and Griffin, Patrick R and Woude, George Vande and Melcher, Karsten and others},
    journal={Structure},
    volume={25},
    number={6},
    pages={867--877},
    year={2017},
    publisher={Elsevier}
    }
  • Mazur, S. J., Gallagher, E. S., Debnath, S., Durell, S. R., Anderson, K. W., Miller Jenkins, L. M., Appella, E., & Hudgens, J. W.. (2017). Conformational changes in active and inactive states of human pp2c$\alpha$ characterized by hydrogen/deuterium exchange–mass spectrometry. Biochemistry, 56(21), 2676–2689.
    [Bibtex]
    @article{mazur2017conformational,
    title={Conformational Changes in Active and Inactive States of Human PP2C$\alpha$ Characterized by Hydrogen/Deuterium Exchange--Mass Spectrometry},
    author={Mazur, Sharlyn J and Gallagher, Elyssia S and Debnath, Subrata and Durell, Stewart R and Anderson, Kyle W and Miller Jenkins, Lisa M and Appella, Ettore and Hudgens, Jeffrey W},
    journal={Biochemistry},
    volume={56},
    number={21},
    pages={2676--2689},
    year={2017},
    publisher={ACS Publications}
    }
  • Srinivasan, S., Nwachukwu, J. C., Bruno, N. E., Dharmarajan, V., Goswami, D., Kastrati, I., Novick, S., Nowak, J., Cavett, V., Zhou, H., & others. (2017). Full antagonism of the estrogen receptor without a prototypical ligand side chain. Nature chemical biology, 13(1), 111–118.
    [Bibtex]
    @article{srinivasan2017full,
    title={Full antagonism of the estrogen receptor without a prototypical ligand side chain},
    author={Srinivasan, Sathish and Nwachukwu, Jerome C and Bruno, Nelson E and Dharmarajan, Venkatasubramanian and Goswami, Devrishi and Kastrati, Irida and Novick, Scott and Nowak, Jason and Cavett, Valerie and Zhou, Hai-Bing and others},
    journal={Nature chemical biology},
    volume={13},
    number={1},
    pages={111--118},
    year={2017},
    publisher={Nature Research}
    }
  • Mays, S. G., Okafor, D. C., Tuntland, M. L., Whitby, R. J., Dharmarajan, V., Stec, J., Griffin, P. R., & Ortlund, E. A.. (2017). Structure and dynamics of the liver receptor homolog 1–pgc1$\alpha$ complex. Molecular pharmacology, 92(1), 1–11.
    [Bibtex]
    @article{mays2017structure,
    title={Structure and Dynamics of the Liver Receptor Homolog 1--PGC1$\alpha$ Complex},
    author={Mays, Suzanne G and Okafor, C Denise and Tuntland, Micheal L and Whitby, Richard J and Dharmarajan, Venkatasubramanian and Stec, J{\'o}zef and Griffin, Patrick R and Ortlund, Eric A},
    journal={Molecular pharmacology},
    volume={92},
    number={1},
    pages={1--11},
    year={2017},
    publisher={ASPET}
    }
  • Masson, G. R., Jenkins, M. L., & Burke, J. E.. (2017). An overview of hydrogen deuterium exchange mass spectrometry (hdx-ms) in drug discovery. Expert opinion on drug discovery, 12(10), 981–994.
    [Bibtex]
    @article{masson2017overview,
    title={An overview of hydrogen deuterium exchange mass spectrometry (HDX-MS) in drug discovery},
    author={Masson, Glenn R and Jenkins, Meredith L and Burke, John E},
    journal={Expert opinion on drug discovery},
    volume={12},
    number={10},
    pages={981--994},
    year={2017},
    publisher={Taylor \& Francis}
    }
  • Cryar, A., Groves, K., & Quaglia, M.. (2017). Online hydrogen-deuterium exchange traveling wave ion mobility mass spectrometry (hdx-im-ms): a systematic evaluation. Journal of the american society for mass spectrometry, 28(6), 1192–1202.
    [Bibtex]
    @article{cryar2017online,
    title={Online Hydrogen-Deuterium Exchange Traveling Wave Ion Mobility Mass Spectrometry (HDX-IM-MS): a Systematic Evaluation},
    author={Cryar, Adam and Groves, Kate and Quaglia, Milena},
    journal={Journal of The American Society for Mass Spectrometry},
    volume={28},
    number={6},
    pages={1192--1202},
    year={2017},
    publisher={Springer}
    }
  • Brown, K. A., & Wilson, D. J.. (2017). Bottom-up hydrogen deuterium exchange mass spectrometry: data analysis and interpretation. Analyst, 142(16), 2874–2886.
    [Bibtex]
    @article{brown2017bottom,
    title={Bottom-up hydrogen deuterium exchange mass spectrometry: data analysis and interpretation},
    author={Brown, Kerene A and Wilson, Derek J},
    journal={Analyst},
    volume={142},
    number={16},
    pages={2874--2886},
    year={2017},
    publisher={Royal Society of Chemistry}
    }
  • Hamuro, Y.. (2017). Determination of equine cytochrome c backbone amide hydrogen/deuterium exchange rates by mass spectrometry using a wider time window and isotope envelope. Journal of the american society for mass spectrometry, 28(3), 486–497.
    [Bibtex]
    @article{hamuro2017determination,
    title={Determination of equine Cytochrome c backbone amide hydrogen/deuterium exchange rates by mass spectrometry using a wider time window and isotope envelope},
    author={Hamuro, Yoshitomo},
    journal={Journal of The American Society for Mass Spectrometry},
    volume={28},
    number={3},
    pages={486--497},
    year={2017},
    publisher={Springer}
    }
  • Claesen, J., & Burzykowski, T.. (2017). Computational methods and challenges in hydrogen/deuterium exchange mass spectrometry. Mass spectrometry reviews, 36(5), 649–667.
    [Bibtex]
    @article{claesen2017computational,
    title={Computational methods and challenges in hydrogen/deuterium exchange mass spectrometry},
    author={Claesen, J{\"u}rgen and Burzykowski, Tomasz},
    journal={Mass spectrometry reviews},
    volume={36},
    number={5},
    pages={649--667},
    year={2017},
    publisher={Wiley Online Library}
    }
  • Huang, R. Y-C., Iacob, R. E., Krystek, S. R., Jin, M., Wei, H., Tao, L., Das, T. K., Tymiak, A. A., Engen, J. R., & Chen, G.. (2017). Characterization of aggregation propensity of a human fc-fusion protein therapeutic by hydrogen/deuterium exchange mass spectrometry. Journal of the american society for mass spectrometry, 28(5), 795–802.
    [Bibtex]
    @article{huang2017characterization,
    title={Characterization of aggregation propensity of a human Fc-fusion protein therapeutic by hydrogen/deuterium exchange mass spectrometry},
    author={Huang, Richard Y-C and Iacob, Roxana E and Krystek, Stanley R and Jin, Mi and Wei, Hui and Tao, Li and Das, Tapan K and Tymiak, Adrienne A and Engen, John R and Chen, Guodong},
    journal={Journal of The American Society for Mass Spectrometry},
    volume={28},
    number={5},
    pages={795--802},
    year={2017},
    publisher={Springer}
    }
  • Wang, L., & Chance, M. R.. (2017). Protein footprinting comes of age: mass spectrometry for biophysical structure assessment. Molecular & cellular proteomics, 16(5), 706–716.
    [Bibtex]
    @article{wang2017protein,
    title={Protein footprinting comes of age: mass spectrometry for biophysical structure assessment},
    author={Wang, Liwen and Chance, Mark R},
    journal={Molecular \& Cellular Proteomics},
    volume={16},
    number={5},
    pages={706--716},
    year={2017},
    publisher={ASBMB}
    }
  • Zhang, X., Zhao, F., Wu, Y., Yang, J., Han, G. W., Zhao, S., Ishchenko, A., Ye, L., Lin, X., Ding, K., & others. (2017). Crystal structure of a multi-domain human smoothened receptor in complex with a super stabilizing ligand. Nature communications, 8, 15383.
    [Bibtex]
    @article{zhang2017crystal,
    title={Crystal structure of a multi-domain human smoothened receptor in complex with a super stabilizing ligand},
    author={Zhang, Xianjun and Zhao, Fei and Wu, Yiran and Yang, Jun and Han, Gye Won and Zhao, Suwen and Ishchenko, Andrii and Ye, Lintao and Lin, Xi and Ding, Kang and others},
    journal={Nature Communications},
    volume={8},
    pages={15383},
    year={2017},
    publisher={Nature Publishing Group}
    }
  • Yang, L., Adhikari, J., Gross, M. L., & Li, L.. (2017). Kinetic isotope effects and hydrogen/deuterium exchange reveal large conformational changes during the catalysis of the clostridium acetobutylicum spore photoproduct lyase. Photochemistry and photobiology, 93(1), 331–342.
    [Bibtex]
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    author={Yang, Linlin and Adhikari, Jagat and Gross, Michael L and Li, Lei},
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    publisher={Wiley Online Library}
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    journal={Nature},
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    title={Nucleotide Binding to ARL2 in the TBCD∙ ARL2∙ $\beta$-Tubulin Complex Drives Conformational Changes in beta-Tubulin},
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    title={Integration of Heterotrimeric G Protein Signaling by the Regulator of G Protein Signaling 14 (RGS14): Independent Regulation of G$\alpha$ Signaling by the RGS Domain and GPR Motif by the RGS domain and GPR motif},
    author={Brown, Nicole E},
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    number={38},
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    year={2014},
    publisher={ASBMB}
    }
  • Armstrong, E. H.. ((2014). The role of fatty acid binding protein 5 (fabp5) in peroxisome proliferator-activated receptor β/δ (pparβ/δ)–mediated fatty acid and retinoic acid signaling: a structural perspective.). PhD Thesis.
    [Bibtex]
    @phdthesis{armstrong2014role,
    title={The Role of Fatty Acid Binding Protein 5 (FABP5) in Peroxisome Proliferator-Activated Receptor β/δ (PPARβ/δ)--Mediated Fatty Acid and Retinoic Acid Signaling: A Structural Perspective},
    author={Armstrong, Eric H},
    year={2014},
    school={Emory University}
    }
  • Zhang, Y., Majumder, E. L-W., Yue, H., Blankenship, R. E., & Gross, M. L.. (2014). Structural analysis of diheme cytochrome c by hydrogen–deuterium exchange mass spectrometry and homology modeling. Biochemistry, 53(35), 5619–5630.
    [Bibtex]
    @article{zhang2014structural,
    title={Structural Analysis of Diheme Cytochrome c by Hydrogen--Deuterium Exchange Mass Spectrometry and Homology Modeling},
    author={Zhang, Ying and Majumder, Erica L-W and Yue, Hai and Blankenship, Robert E and Gross, Michael L},
    journal={Biochemistry},
    volume={53},
    number={35},
    pages={5619--5630},
    year={2014},
    publisher={ACS Publications}
    }
  • Wowor, A. J., Yan, Y., Auclair, S. M., Yu, D., Zhang, J., May, E. R., Gross, M. L., Kendall, D. A., & Cole, J. L.. (2014). Analysis of seca dimerization in solution. Biochemistry, 53(19), 3248–3260.
    [Bibtex]
    @article{wowor2014analysis,
    title={Analysis of SecA dimerization in solution},
    author={Wowor, Andy J and Yan, Yuetian and Auclair, Sarah M and Yu, Dongmei and Zhang, Jun and May, Eric R and Gross, Michael L and Kendall, Debra A and Cole, James L},
    journal={Biochemistry},
    volume={53},
    number={19},
    pages={3248--3260},
    year={2014},
    publisher={ACS Publications}
    }
  • West, G. M., Willard, F. S., Sloop, K. W., Showalter, A. D., Pascal, B. D., & Griffin, P. R.. (2014). Glucagon-like peptide-1 receptor ligand interactions: structural cross talk between ligands and the extracellular domain. Plos one, 9(9), e105683.
    [Bibtex]
    @article{west2014glucagon,
    title={Glucagon-like peptide-1 receptor ligand interactions: structural cross talk between ligands and the extracellular domain},
    author={West, Graham M and Willard, Francis S and Sloop, Kyle W and Showalter, Aaron D and Pascal, Bruce D and Griffin, Patrick R},
    journal={PloS one},
    volume={9},
    number={9},
    pages={e105683},
    year={2014},
    publisher={Public Library of Science}
    }
  • Wang, J.. (2014). Interaction of the components in human and escherichia coli pyruvate dehydrogenase multienzyme complexes Rutgers The State University of New Jersey-Newark.
    [Bibtex]
    @book{wang2014interaction,
    title={Interaction of the components in human and escherichia coli pyruvate dehydrogenase multienzyme complexes},
    author={Wang, Junjie},
    year={2014},
    publisher={Rutgers The State University of New Jersey-Newark}
    }
  • Zheng, J., Yong, H. Y., Panutdaporn, N., Liu, C., Tang, K., & Luo, D.. (2014). High-resolution hdx-ms reveals distinct mechanisms of rna recognition and activation by rig-i and mda5. Nucleic acids research, 43(2), 1216–1230.
    [Bibtex]
    @article{zheng2014high,
    title={High-resolution HDX-MS reveals distinct mechanisms of RNA recognition and activation by RIG-I and MDA5},
    author={Zheng, Jie and Yong, Hui Yee and Panutdaporn, Nantika and Liu, Chuanfa and Tang, Kai and Luo, Dahai},
    journal={Nucleic acids research},
    volume={43},
    number={2},
    pages={1216--1230},
    year={2014},
    publisher={Oxford University Press}
    }
  • Qiang, G., Xue, S., Yang, J. J., Du, G., Pang, X., Li, X., Goswami, D., Griffin, P. R., Ortlund, E. A., Chan, C. B., & others. (2014). Identification of a small molecular insulin receptor agonist with potent antidiabetes activity. Diabetes, 63(4), 1394–1409.
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    @article{qiang2014identification,
    title={Identification of a small molecular insulin receptor agonist with potent antidiabetes activity},
    author={Qiang, Guifen and Xue, Shenghui and Yang, Jenny J and Du, Guanhua and Pang, Xiaobin and Li, Xiaoting and Goswami, Devrishi and Griffin, Patrick R and Ortlund, Eric A and Chan, Chi Bun and others},
    journal={Diabetes},
    volume={63},
    number={4},
    pages={1394--1409},
    year={2014},
    publisher={Am Diabetes Assoc}
    }
  • Zhang, Y., Goswami, D., Wang, D., Wang, T. A., Sen, S., Magliery, T. J., Griffin, P. R., Wang, F., & Schultz, P. G.. (2014). An antibody with a variable-region coiled-coil “knob” domain. Angewandte chemie, 126(1), 136–139.
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    @article{zhang2014antibody,
    title={An Antibody with a Variable-Region Coiled-Coil “Knob” Domain},
    author={Zhang, Yong and Goswami, Devrishi and Wang, Danling and Wang, Tsung-Shing Andrew and Sen, Shiladitya and Magliery, Thomas J and Griffin, Patrick R and Wang, Feng and Schultz, Peter G},
    journal={Angewandte Chemie},
    volume={126},
    number={1},
    pages={136--139},
    year={2014},
    publisher={Wiley Online Library}
    }
  • Lindner, R., Lou, X., Reinstein, J., Shoeman, R. L., Hamprecht, F. A., & Winkler, A.. (2014). Hexicon 2: automated processing of hydrogen-deuterium exchange mass spectrometry data with improved deuteration distribution estimation. Journal of the american society for mass spectrometry, 25(6), 1018–1028.
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    @article{lindner2014hexicon,
    title={Hexicon 2: automated processing of hydrogen-deuterium exchange mass spectrometry data with improved deuteration distribution estimation},
    author={Lindner, Robert and Lou, Xinghua and Reinstein, Jochen and Shoeman, Robert L and Hamprecht, Fred A and Winkler, Andreas},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={25},
    number={6},
    pages={1018--1028},
    year={2014},
    publisher={Springer}
    }
  • Armstrong, E. H., Goswami, D., Griffin, P. R., Noy, N., & Ortlund, E. A.. (2014). Structural basis for ligand regulation of the fatty acid-binding protein 5, peroxisome proliferator-activated receptor $\beta$/$\delta$ (fabp5-ppar$\beta$/$\delta$) signaling pathway. Journal of biological chemistry, 289(21), 14941–14954.
    [Bibtex]
    @article{armstrong2014structural,
    title={Structural basis for ligand regulation of the fatty acid-binding protein 5, peroxisome proliferator-activated receptor $\beta$/$\delta$ (FABP5-PPAR$\beta$/$\delta$) signaling pathway},
    author={Armstrong, Eric H and Goswami, Devrishi and Griffin, Patrick R and Noy, Noa and Ortlund, Eric A},
    journal={Journal of Biological Chemistry},
    volume={289},
    number={21},
    pages={14941--14954},
    year={2014},
    publisher={ASBMB}
    }
  • Kirschke, E., Goswami, D., Southworth, D., Griffin, P. R., & Agard, D. A.. (2014). Glucocorticoid receptor function regulated by coordinated action of the hsp90 and hsp70 chaperone cycles. Cell, 157(7), 1685–1697.
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    @article{kirschke2014glucocorticoid,
    title={Glucocorticoid receptor function regulated by coordinated action of the Hsp90 and Hsp70 chaperone cycles},
    author={Kirschke, Elaine and Goswami, Devrishi and Southworth, Daniel and Griffin, Patrick R and Agard, David A},
    journal={Cell},
    volume={157},
    number={7},
    pages={1685--1697},
    year={2014},
    publisher={Elsevier}
    }
  • Hughes, T. S., Giri, P. K., De Vera, I. M. S., Marciano, D. P., Kuruvilla, D. S., Shin, Y., Blayo, A., Kamenecka, T. M., Burris, T. P., Griffin, P. R., & others. (2014). An alternate binding site for ppar$\gamma$ ligands. Nature communications, 5, 3571.
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    @article{hughes2014alternate,
    title={An alternate binding site for PPAR$\gamma$ ligands},
    author={Hughes, Travis S and Giri, Pankaj Kumar and De Vera, Ian Mitchelle S and Marciano, David P and Kuruvilla, Dana S and Shin, Youseung and Blayo, Anne-Laure and Kamenecka, Theodore M and Burris, Thomas P and Griffin, Patrick R and others},
    journal={Nature communications},
    volume={5},
    pages={3571},
    year={2014},
    publisher={Nature Publishing Group}
    }
  • Pirrone, G. F., Iacob, R. E., & Engen, J. R.. (2014). Applications of hydrogen/deuterium exchange ms from 2012 to 2014. Analytical chemistry, 87(1), 99–118.
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    @article{pirrone2014applications,
    title={Applications of hydrogen/deuterium exchange MS from 2012 to 2014},
    author={Pirrone, Gregory F and Iacob, Roxana E and Engen, John R},
    journal={Analytical chemistry},
    volume={87},
    number={1},
    pages={99--118},
    year={2014},
    publisher={ACS Publications}
    }
  • Underbakke, E. S., Iavarone, A. T., Chalmers, M. J., Pascal, B. D., Novick, S., Griffin, P. R., & Marletta, M. A.. (2014). Nitric oxide-induced conformational changes in soluble guanylate cyclase. Structure, 22(4), 602–611.
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    @article{underbakke2014nitric,
    title={Nitric oxide-induced conformational changes in soluble guanylate cyclase},
    author={Underbakke, Eric S and Iavarone, Anthony T and Chalmers, Michael J and Pascal, Bruce D and Novick, Scott and Griffin, Patrick R and Marletta, Michael A},
    journal={Structure},
    volume={22},
    number={4},
    pages={602--611},
    year={2014},
    publisher={Elsevier}
    }
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    @article{marciano2014hdx,
    title={HDX-MS guided drug discovery: small molecules and biopharmaceuticals},
    author={Marciano, David P and Dharmarajan, Venkatasubramanian and Griffin, Patrick R},
    journal={Current opinion in structural biology},
    volume={28},
    pages={105--111},
    year={2014},
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    }
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    @article{huang2014higher,
    title={Higher order structure characterization of protein therapeutics by hydrogen/deuterium exchange mass spectrometry},
    author={Huang, Richard Y-C and Chen, Guodong},
    journal={Analytical and bioanalytical chemistry},
    volume={406},
    number={26},
    pages={6541--6558},
    year={2014},
    publisher={Springer}
    }
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    title={Mass spec studio for integrative structural biology},
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    journal={Structure},
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    number={10},
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    year={2014},
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    }
  • Li, Z.. ((2013). Archaeal dna replication proteins: members and functions.). PhD Thesis.
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    @phdthesis{li2013archaeal,
    title={Archaeal DNA replication proteins: Members and functions},
    author={Li, Zhuo},
    year={2013},
    school={University of Maryland, College Park}
    }
  • Liu, Q., Easterling, M. L., & Agar, J. N.. (2013). Resolving isotopic fine structure to detect and quantify natural abundance-and hydrogen/deuterium exchange-derived isotopomers. Analytical chemistry, 86(1), 820–825.
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    @article{liu2013resolving,
    title={Resolving isotopic fine structure to detect and quantify natural abundance-and hydrogen/deuterium exchange-derived isotopomers},
    author={Liu, Qian and Easterling, Michael L and Agar, Jeffrey N},
    journal={Analytical chemistry},
    volume={86},
    number={1},
    pages={820--825},
    year={2013},
    publisher={ACS Publications}
    }
  • Ahn, J.. (2013). Local hydrogen deuterium exchange mass spectrometry: from pressurized online digestion to pepsin proteolysis.. .
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    @article{ahn2013local,
    title={Local hydrogen deuterium exchange mass spectrometry: from pressurized online digestion to pepsin proteolysis.},
    author={Ahn, Joomi},
    year={2013}
    }
  • Hu, Y., & others. (2013). Application of hydrogen-deuterium exchange/mass spectrometry for determination of cytochrome c orientation on sams.. .
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    @article{hu2013application,
    title={Application of Hydrogen-Deuterium Exchange/Mass Spectrometry for Determination of Cytochrome c Orientation on SAMs.},
    author={Hu, Yuzhe and others},
    year={2013}
    }
  • Singh, H.. ((2013). Hydrogen deuterium exchange mass spectrometry for protein-protein interaction and structural dynamics.). PhD Thesis.
    [Bibtex]
    @phdthesis{singh2013hydrogen,
    title={Hydrogen deuterium exchange mass spectrometry for protein-protein interaction and structural dynamics},
    author={Singh, Harsimran},
    year={2013},
    school={University of Alabama Libraries}
    }
  • Zhang, Q.. ((2013). Hydrogen/deuterium exchange coupled with ft-icr ms–instrumentation, software development and applications.). PhD Thesis.
    [Bibtex]
    @phdthesis{zhang2013hydrogen,
    title={Hydrogen/deuterium exchange coupled with FT-ICR MS--Instrumentation, software development and applications},
    author={Zhang, Qian},
    year={2013},
    school={The Florida State University}
    }
  • Wang, X., Li, Q., & Davies, M.. (2013). Development of antibody arrays for monoclonal antibody higher order structure analysis. Frontiers in pharmacology, 4, 103.
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    @article{wang2013development,
    title={Development of antibody arrays for monoclonal antibody Higher Order Structure analysis},
    author={Wang, Xing and Li, Qing and Davies, Michael},
    journal={Frontiers in pharmacology},
    volume={4},
    pages={103},
    year={2013},
    publisher={Frontiers}
    }
  • Huang, R. Y-C., & Hudgens, J. W.. (2013). Effects of desialylation on human α1-acid glycoprotein− ligand interactions. Biochemistry, 52(40), 7127–7136.
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    @article{huang2013effects,
    title={Effects of Desialylation on Human α1-Acid Glycoprotein− Ligand Interactions},
    author={Huang, Richard Y-C and Hudgens, Jeffrey W},
    journal={Biochemistry},
    volume={52},
    number={40},
    pages={7127--7136},
    year={2013},
    publisher={ACS Publications}
    }
  • Underbakke, E. S., Iavarone, A. T., & Marletta, M. A.. (2013). Higher-order interactions bridge the nitric oxide receptor and catalytic domains of soluble guanylate cyclase. Proceedings of the national academy of sciences, 110(17), 6777–6782.
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    @article{underbakke2013higher,
    title={Higher-order interactions bridge the nitric oxide receptor and catalytic domains of soluble guanylate cyclase},
    author={Underbakke, Eric S and Iavarone, Anthony T and Marletta, Michael A},
    journal={Proceedings of the National Academy of Sciences},
    volume={110},
    number={17},
    pages={6777--6782},
    year={2013},
    publisher={National Acad Sciences}
    }
  • Zhang, J., Ramachandran, P., Kumar, R., & Gross, M. L.. (2013). H/d exchange centroid monitoring is insufficient to show differences in the behavior of protein states. Journal of the american society for mass spectrometry, 24(3), 450–453.
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    @article{zhang2013h,
    title={H/D exchange centroid monitoring is insufficient to show differences in the behavior of protein states},
    author={Zhang, Jun and Ramachandran, Pradeep and Kumar, Rajiv and Gross, Michael L},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={24},
    number={3},
    pages={450--453},
    year={2013},
    publisher={Springer}
    }
  • Goswami, D., Devarakonda, S., Chalmers, M. J., Pascal, B. D., Spiegelman, B. M., & Griffin, P. R.. (2013). Time window expansion for hdx analysis of an intrinsically disordered protein. Journal of the american society for mass spectrometry, 24(10), 1584–1592.
    [Bibtex]
    @article{goswami2013time,
    title={Time window expansion for HDX analysis of an intrinsically disordered protein},
    author={Goswami, Devrishi and Devarakonda, Srikripa and Chalmers, Michael J and Pascal, Bruce D and Spiegelman, Bruce M and Griffin, Patrick R},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={24},
    number={10},
    pages={1584--1592},
    year={2013},
    publisher={Springer}
    }
  • Guttman, M., Weis, D. D., Engen, J. R., & Lee, K. K.. (2013). Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra. Journal of the american society for mass spectrometry, 24(12), 1906–1912.
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    @article{guttman2013analysis,
    title={Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra},
    author={Guttman, Miklos and Weis, David D and Engen, John R and Lee, Kelly K},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={24},
    number={12},
    pages={1906--1912},
    year={2013},
    publisher={Springer}
    }
  • Konermann, L., Vahidi, S., & Sowole, M. A.. (2013). Mass spectrometry methods for studying structure and dynamics of biological macromolecules. Analytical chemistry, 86(1), 213–232.
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    @article{konermann2013mass,
    title={Mass spectrometry methods for studying structure and dynamics of biological macromolecules},
    author={Konermann, Lars and Vahidi, Siavash and Sowole, Modupeola A},
    journal={Analytical chemistry},
    volume={86},
    number={1},
    pages={213--232},
    year={2013},
    publisher={ACS Publications}
    }
  • Konijnenberg, A., Butterer, A., & Sobott, F.. (2013). Native ion mobility-mass spectrometry and related methods in structural biology. Biochimica et biophysica acta (bba)-proteins and proteomics, 1834(6), 1239–1256.
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    @article{konijnenberg2013native,
    title={Native ion mobility-mass spectrometry and related methods in structural biology},
    author={Konijnenberg, A and Butterer, A and Sobott, F},
    journal={Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics},
    volume={1834},
    number={6},
    pages={1239--1256},
    year={2013},
    publisher={Elsevier}
    }
  • Nakorchevsky, A., & Yates, J.. (2012). 1.17 mass spectrometry. .
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    @article{nakorchevsky20121,
    title={1.17 Mass Spectrometry},
    author={Nakorchevsky, A and Yates, JR},
    year={2012},
    publisher={Elsevier}
    }
  • Meyer, M., Shah, S., & Rao, A.. (2012). A paper to be submitted for publication.. The arabidopsis crinkly4 receptor-like kinase and homologs: regulation of kinase activity through intra-and intermolecular interactions, 1001, 116.
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    @article{meyer2012paper,
    title={A paper to be submitted for publication.},
    author={Meyer, MR and Shah, S and Rao, AG},
    journal={The Arabidopsis CRINKLY4 receptor-like kinase and homologs: Regulation of kinase activity through intra-and intermolecular interactions},
    volume={1001},
    pages={116},
    year={2012}
    }
  • Fajer, P. G., Bou-Assaf, G. M., & Marshall, A. G.. (2012). Improved sequence resolution by global analysis of overlapped peptides in hydrogen/deuterium exchange mass spectrometry. Journal of the american society for mass spectrometry, 23(7), 1202–1208.
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    @article{fajer2012improved,
    title={Improved sequence resolution by global analysis of overlapped peptides in hydrogen/deuterium exchange mass spectrometry},
    author={Fajer, Piotr G and Bou-Assaf, George M and Marshall, Alan G},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={23},
    number={7},
    pages={1202--1208},
    year={2012},
    publisher={Springer}
    }
  • Kaur, P., & Chance, M. R.. (2012). The utility of mass spectrometry based structural proteomics in biopharmaceutical biologics development. In Integrative proteomics InTech.
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    @incollection{kaur2012utility,
    title={The utility of mass spectrometry based structural proteomics in biopharmaceutical biologics development},
    author={Kaur, Parminder and Chance, Mark R},
    booktitle={Integrative Proteomics},
    year={2012},
    publisher={InTech}
    }
  • Wani, A. H., & Udgaonkar, J. B.. (2012). Mass spectrometry studies of protein folding. Curr sci, 102(2), 245–265.
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    @article{wani2012mass,
    title={Mass spectrometry studies of protein folding},
    author={Wani, Ajazul Hamid and Udgaonkar, Jayant B},
    journal={Curr Sci},
    volume={102},
    number={2},
    pages={245--265},
    year={2012}
    }
  • Lampi, K. J., Fox, C. B., & David, L. L.. (2012). Changes in solvent accessibility of wild-type and deamidated $\beta$b2-crystallin following complex formation with $\alpha$a-crystallin. Experimental eye research, 104, 48–58.
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    @article{lampi2012changes,
    title={Changes in solvent accessibility of wild-type and deamidated $\beta$B2-crystallin following complex formation with $\alpha$A-crystallin},
    author={Lampi, Kirsten J and Fox, Cade B and David, Larry L},
    journal={Experimental eye research},
    volume={104},
    pages={48--58},
    year={2012},
    publisher={Elsevier}
    }
  • Bobst, C. E., & Kaltashov, I. A.. (2012). Localizing flexible regions in proteins using hydrogen–deuterium exchange mass spectrometry. In Intrinsically disordered protein analysis (pp. 375–385). Springer.
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    @incollection{bobst2012localizing,
    title={Localizing flexible regions in proteins using hydrogen--deuterium exchange mass spectrometry},
    author={Bobst, Cedric E and Kaltashov, Igor A},
    booktitle={Intrinsically Disordered Protein Analysis},
    pages={375--385},
    year={2012},
    publisher={Springer}
    }
  • Prage, E. B.. (2012). Structural studies of inhibition of the human inducible prostaglandin e synthase mpges1 Vanderbilt University.
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    @book{prage2012structural,
    title={Structural studies of inhibition of the human inducible prostaglandin E synthase MPGES1},
    author={Prage, Edward B},
    year={2012},
    publisher={Vanderbilt University}
    }
  • Miller, D. E., Prasannan, C. B., Villar, M. T., Fenton, A. W., & Artigues, A.. (2012). Hdxfinder: automated analysis and data reporting of deuterium/hydrogen exchange mass spectrometry. Journal of the american society for mass spectrometry, 23(2), 425–429.
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    @article{miller2012hdxfinder,
    title={HDXFinder: automated analysis and data reporting of deuterium/hydrogen exchange mass spectrometry},
    author={Miller, Danny E and Prasannan, Charulata B and Villar, Maria T and Fenton, Aron W and Artigues, Antonio},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={23},
    number={2},
    pages={425--429},
    year={2012},
    publisher={Springer}
    }
  • Mizwicki, M. T., Menegaz, D., Zhang, J., Barrientos-Durán, A., Tse, S., Cashman, J. R., Griffin, P. R., & Fiala, M.. (2012). Genomic and nongenomic signaling induced by 1$\alpha$, 25 (oh) 2-vitamin d 3 promotes the recovery of amyloid-$\beta$ phagocytosis by alzheimer’s disease macrophages. Journal of alzheimer’s disease, 29(1), 51–62.
    [Bibtex]
    @article{mizwicki2012genomic,
    title={Genomic and nongenomic signaling induced by 1$\alpha$, 25 (OH) 2-vitamin D 3 promotes the recovery of amyloid-$\beta$ phagocytosis by Alzheimer's disease macrophages},
    author={Mizwicki, Mathew T and Menegaz, Danusa and Zhang, Jun and Barrientos-Dur{\'a}n, Antonio and Tse, Stephen and Cashman, John R and Griffin, Patrick R and Fiala, Milan},
    journal={Journal of Alzheimer's Disease},
    volume={29},
    number={1},
    pages={51--62},
    year={2012},
    publisher={IOS Press}
    }
  • Brock, A.. (2012). Fragmentation hydrogen exchange mass spectrometry: a review of methodology and applications. Protein expression and purification, 84(1), 19–37.
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    @article{brock2012fragmentation,
    title={Fragmentation hydrogen exchange mass spectrometry: A review of methodology and applications},
    author={Brock, Ansgar},
    journal={Protein expression and purification},
    volume={84},
    number={1},
    pages={19--37},
    year={2012},
    publisher={Elsevier}
    }
  • Walters, B. T., Ricciuti, A., Mayne, L., & Englander, W. S.. (2012). Minimizing back exchange in the hydrogen exchange-mass spectrometry experiment. Journal of the american society for mass spectrometry, 23(12), 2132–2139.
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    @article{walters2012minimizing,
    title={Minimizing back exchange in the hydrogen exchange-mass spectrometry experiment},
    author={Walters, Benjamin T and Ricciuti, Alec and Mayne, Leland and Englander, S Walter},
    journal={Journal of the American Society for Mass Spectrometry},
    volume={23},
    number={12},
    pages={2132--2139},
    year={2012},
    publisher={Springer}
    }
  • Hughes, T. S., Chalmers, M. J., Novick, S., Kuruvilla, D. S., Chang, M. R., Kamenecka, T. M., Rance, M., Johnson, B. A., Burris, T. P., Griffin, P. R., & others. (2012). Ligand and receptor dynamics contribute to the mechanism of graded ppar$\gamma$ agonism. Structure, 20(1), 139–150.
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    @article{hughes2012ligand,
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