Publications

Publications are stories, and HDX Workbench is hands down the most cited analysis software in the field, including nineteen Nature publications. Below is a list of publications that cite our software or its derivative work, so look at all of the scientific stories below and see what you can do with HDX Workbench!

  • de Vera, I. M. S., Munoz-Tello, P., Zheng, J., Dharmarajan, V., Marciano, D. P., Matta-Camacho, E., Giri, P. K., Shang, J., Hughes, T. S., Rance, M., & others. (2019). Defining a canonical ligand-binding pocket in the orphan nuclear receptor nurr1. Structure, 27(1), 66–77.
    [Bibtex]
    @article{de2019defining,
    title={Defining a canonical ligand-binding pocket in the orphan nuclear receptor Nurr1},
    author={de Vera, Ian Mitchelle S and Munoz-Tello, Paola and Zheng, Jie and Dharmarajan, Venkatasubramanian and Marciano, David P and Matta-Camacho, Edna and Giri, Pankaj Kumar and Shang, Jinsai and Hughes, Travis S and Rance, Mark and others},
    journal={Structure},
    volume={27},
    number={1},
    pages={66--77},
    year={2019},
    publisher={Elsevier}
    }
  • Mosure, S., Shang, J., Eberhardt, J., Brust, R., Zheng, J., Griffin, P. R., Forli, S., & Kojetin, D. J.. (2019). Structural basis of altered potency and efficacy displayed by a major in vivo metabolite of the anti-diabetic ppar$\gamma$ drug pioglitazone. Journal of medicinal chemistry.
    [Bibtex]
    @article{mosure2019structural,
    title={Structural basis of altered potency and efficacy displayed by a major in vivo metabolite of the anti-diabetic PPAR$\gamma$ drug pioglitazone},
    author={Mosure, Sarah and Shang, Jinsai and Eberhardt, Jerome and Brust, Richard and Zheng, Jie and Griffin, Patrick R and Forli, Stefano and Kojetin, Douglas J},
    journal={Journal of medicinal chemistry},
    year={2019},
    publisher={ACS Publications}
    }
  • Na, S., Lee, J., Joo, J. W. J., Lee, K., & Paek, E.. (2019). Demix: decoding deuterated distributions from heterogeneous protein states via hdx-ms. Scientific reports, 9(1), 3176.
    [Bibtex]
    @article{na2019demix,
    title={deMix: Decoding Deuterated Distributions from Heterogeneous Protein States via HDX-MS},
    author={Na, Seungjin and Lee, Jae-Jin and Joo, Jong Wha J and Lee, Kong-Joo and Paek, Eunok},
    journal={Scientific reports},
    volume={9},
    number={1},
    pages={3176},
    year={2019},
    publisher={Nature Publishing Group}
    }
  • Salinas, N. D., Paing, M. M., Adhikari, J., Gross, M. L., & Tolia, N.. (2019). Moderately-neutralizing epitopes in non-functional regions dominate the antibody response to plasmodium falciparum eba-140. Infection and immunity, IAI–00716.
    [Bibtex]
    @article{salinas2019moderately,
    title={Moderately-neutralizing epitopes in non-functional regions dominate the antibody response to Plasmodium falciparum EBA-140},
    author={Salinas, Nichole D and Paing, May M and Adhikari, Jagat and Gross, Michael L and Tolia, Niraj},
    journal={Infection and immunity},
    pages={IAI--00716},
    year={2019},
    publisher={Am Soc Microbiol}
    }
  • Lafita, A., Bliven, S., Prlić, A., Guzenko, D., Rose, P. W., Bradley, A., Pavan, P., Myers-Turnbull, D., Valasatava, Y., Heuer, M., & others. (2019). Biojava 5: a community driven open-source bioinformatics library. Plos computational biology, 15(2), e1006791.
    [Bibtex]
    @article{lafita2019biojava,
    title={BioJava 5: A community driven open-source bioinformatics library},
    author={Lafita, Aleix and Bliven, Spencer and Prli{\'c}, Andreas and Guzenko, Dmytro and Rose, Peter W and Bradley, Anthony and Pavan, Paolo and Myers-Turnbull, Douglas and Valasatava, Yana and Heuer, Michael and others},
    journal={PLoS computational biology},
    volume={15},
    number={2},
    pages={e1006791},
    year={2019},
    publisher={Public Library of Science}
    }
  • Deyaert, E., Leemans, M., Singh, R. K., Gallardo, R., Steyaert, J., Kortholt, A., Lauer, J., & Versées, W.. (2019). Structure and nucleotide-induced conformational dynamics of the chlorobium tepidum roco protein. Biochemical journal, 476(1), 51–66.
    [Bibtex]
    @article{deyaert2019structure,
    title={Structure and nucleotide-induced conformational dynamics of the Chlorobium tepidum Roco protein},
    author={Deyaert, Egon and Leemans, Margaux and Singh, Ranjan Kumar and Gallardo, Rodrigo and Steyaert, Jan and Kortholt, Arjan and Lauer, Janelle and Vers{\'e}es, Wim},
    journal={Biochemical Journal},
    volume={476},
    number={1},
    pages={51--66},
    year={2019},
    publisher={Portland Press Limited}
    }
  • Yan, Y., Zhou, E. X., Novick, S. J., Shaw, S. J., Li, Y., Brunzelle, J. S., Hitoshi, Y., Griffin, P. R., Xu, E. H., & Melcher, K.. (2019). Structures of amp-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states. Journal of biological chemistry, 294(3), 953–967.
    [Bibtex]
    @article{yan2019structures,
    title={Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states},
    author={Yan, Yan and Zhou, X Edward and Novick, Scott J and Shaw, Simon J and Li, Yingwu and Brunzelle, Joseph S and Hitoshi, Yasumichi and Griffin, Patrick R and Xu, H Eric and Melcher, Karsten},
    journal={Journal of Biological Chemistry},
    volume={294},
    number={3},
    pages={953--967},
    year={2019},
    publisher={ASBMB}
    }
  • Zhang, C., Konermann, S., Brideau, N. J., Lotfy, P., Wu, X., Novick, S. J., Strutzenberg, T., Griffin, P. R., Hsu, P. D., & Lyumkis, D.. (2018). Structural basis for the rna-guided ribonuclease activity of crispr-cas13d. Cell, 175(1), 212–223.
    [Bibtex]
    @article{zhang2018structural,
    title={Structural basis for the RNA-guided ribonuclease activity of CRISPR-Cas13d},
    author={Zhang, Cheng and Konermann, Silvana and Brideau, Nicholas J and Lotfy, Peter and Wu, Xuebing and Novick, Scott J and Strutzenberg, Timothy and Griffin, Patrick R and Hsu, Patrick D and Lyumkis, Dmitry},
    journal={Cell},
    volume={175},
    number={1},
    pages={212--223},
    year={2018},
    publisher={Elsevier}
    }
  • Lau, A. M., Ahdash, Z., Martens, C., & Politis, A.. (2018). Deuteros: software for rapid analysis and visualization of data from differential hydrogen deuterium exchange-mass spectrometry. Biorxiv, 417998.
    [Bibtex]
    @article{lau2018deuteros,
    title={Deuteros: software for rapid analysis and visualization of data from differential hydrogen deuterium exchange-mass spectrometry},
    author={Lau, Andy MC and Ahdash, Zainab and Martens, Chloe and Politis, Argyris},
    journal={bioRxiv},
    pages={417998},
    year={2018},
    publisher={Cold Spring Harbor Laboratory}
    }
  • Fassler, R., Edinger, N., Rimon, O., & Reichmann, D.. (2018). Defining hsp33’s redox-regulated chaperone activity and mapping conformational changes on hsp33 using hydrogen-deuterium exchange mass spectrometry. Jove (journal of visualized experiments)(136), e57806.
    [Bibtex]
    @article{fassler2018defining,
    title={Defining Hsp33's Redox-regulated Chaperone Activity and Mapping Conformational Changes on Hsp33 Using Hydrogen-deuterium Exchange Mass Spectrometry},
    author={Fassler, Rosi and Edinger, Nufar and Rimon, Oded and Reichmann, Dana},
    journal={JoVE (Journal of Visualized Experiments)},
    number={136},
    pages={e57806},
    year={2018}
    }
  • Frkic, R. L., Chua, B. S., Shin, Y., Pascal, B. D., Novick, S. J., Kamenecka, T. M., Griffin, P. R., & Bruning, J. B.. (2018). Structural and dynamic elucidation of a non-acid ppar𝛾 partial agonist: sr1988. .
    [Bibtex]
    @article{frkic2018structural,
    title={Structural and Dynamic Elucidation of a Non-acid PPAR𝛾 Partial Agonist: SR1988},
    author={Frkic, Rebecca L and Chua, Benjamin S and Shin, Youseung and Pascal, Bruce D and Novick, Scott J and Kamenecka, Theodore M and Griffin, Patrick R and Bruning, John B},
    year={2018}
    }
  • Patil, D. N., Rangarajan, E. S., Novick, S. J., Pascal, B. D., Kojetin, D. J., Griffin, P. R., Izard, T., & Martemyanov, K. A.. (2018). Structural organization of a major neuronal g protein regulator, the rgs7-g$\beta$5-r7bp complex. Elife, 7, e42150.
    [Bibtex]
    @article{patil2018structural,
    title={Structural organization of a major neuronal G protein regulator, the RGS7-G$\beta$5-R7BP complex},
    author={Patil, Dipak N and Rangarajan, Erumbi S and Novick, Scott J and Pascal, Bruce D and Kojetin, Douglas J and Griffin, Patrick R and Izard, Tina and Martemyanov, Kirill A},
    journal={eLife},
    volume={7},
    pages={e42150},
    year={2018},
    publisher={eLife Sciences Publications Limited}
    }
  • Sanulli, S., Trnka, M. J., Dharmarajan, V., Tibble, R. W., Pascal, B. D., Burlingame, A. L., Griffin, P. R., Gross, J. D., & Narlikar, G. J.. (2018). Disorganization of the histone core promotes organization of heterochromatin into phase-separated droplets. Biorxiv, 473132.
    [Bibtex]
    @article{sanulli2018disorganization,
    title={Disorganization of the histone core promotes organization of heterochromatin into phase-separated droplets},
    author={Sanulli, Serena and Trnka, Mike J and Dharmarajan, Venkat and Tibble, Ryan W and Pascal, Bruce D and Burlingame, Alma L and Griffin, Patrick R and Gross, John D and Narlikar, Geeta J},
    journal={bioRxiv},
    pages={473132},
    year={2018},
    publisher={Cold Spring Harbor Laboratory}
    }
  • Robin, A. Y., Iyer, S., Birkinshaw, R. W., Sandow, J., Wardak, A., Luo, C. S., Shi, M., Webb, A. I., Czabotar, P. E., Kluck, R. M., & others. (2018). Ensemble properties of bax determine its function. Structure, 26(10), 1346–1359.
    [Bibtex]
    @article{robin2018ensemble,
    title={Ensemble Properties of Bax Determine Its Function},
    author={Robin, Adeline Y and Iyer, Sweta and Birkinshaw, Richard W and Sandow, Jarrod and Wardak, Ahmad and Luo, Cindy S and Shi, Melissa and Webb, Andrew I and Czabotar, Peter E and Kluck, Ruth M and others},
    journal={Structure},
    volume={26},
    number={10},
    pages={1346--1359},
    year={2018},
    publisher={Elsevier}
    }
  • Háda, V., Bagdi, A., Bihari, Z., Timári, S. B., Fizil, Ádám., & Szántay Jr, C.. (2018). Recent advancements, challenges, and practical considerations in the mass spectrometry-based analytics of protein biotherapeutics: a viewpoint from the biosimilar industry. Journal of pharmaceutical and biomedical analysis.
    [Bibtex]
    @article{hada2018recent,
    title={Recent advancements, challenges, and practical considerations in the mass spectrometry-based analytics of protein biotherapeutics: A viewpoint from the biosimilar industry},
    author={H{\'a}da, Viktor and Bagdi, Attila and Bihari, Zsolt and Tim{\'a}ri, Sarolta Bagin{\'e} and Fizil, {\'A}d{\'a}m and Sz{\'a}ntay Jr, Csaba},
    journal={Journal of pharmaceutical and biomedical analysis},
    year={2018},
    publisher={Elsevier}
    }
  • Woodcock, J. M., Goodwin, K. L., Sandow, J. J., Coolen, C., Perugini, M. A., Webb, A. I., Pitson, S. M., Lopez, A. F., & Carver, J. A.. (2018). Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, n-terminal $\alpha$-helical order, and molecular chaperone activity. Journal of biological chemistry, 293(1), 89–99.
    [Bibtex]
    @article{woodcock2018role,
    title={Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, N-terminal $\alpha$-helical order, and molecular chaperone activity},
    author={Woodcock, Joanna M and Goodwin, Katy L and Sandow, Jarrod J and Coolen, Carl and Perugini, Matthew A and Webb, Andrew I and Pitson, Stuart M and Lopez, Angel F and Carver, John A},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={1},
    pages={89--99},
    year={2018},
    publisher={ASBMB}
    }
  • Kim, H., Wrann, C. D., Jedrychowski, M., Vidoni, S., Kitase, Y., Nagano, K., Zhou, C., Chou, J., Parkman, V. A., Novick, S. J., & others. (2018). Irisin mediates effects on bone and fat via $\alpha$v integrin receptors. Cell, 175(7), 1756–1768.
    [Bibtex]
    @article{kim2018irisin,
    title={Irisin Mediates Effects on Bone and Fat via $\alpha$V Integrin Receptors},
    author={Kim, Hyeonwoo and Wrann, Christiane D and Jedrychowski, Mark and Vidoni, Sara and Kitase, Yukiko and Nagano, Kenichi and Zhou, Chenhe and Chou, Joshua and Parkman, Virginia-Jeni A and Novick, Scott J and others},
    journal={Cell},
    volume={175},
    number={7},
    pages={1756--1768},
    year={2018},
    publisher={Elsevier}
    }
  • Hung, P. J., Johnson, B., Chen, B., Byrum, A. K., Bredemeyer, A. L., Yewdell, W. T., Johnson, T. E., Lee, B. J., Deivasigamani, S., Hindi, I., & others. (2018). Mri is a dna damage response adaptor during classical non-homologous end joining. Molecular cell, 71(2), 332–342.
    [Bibtex]
    @article{hung2018mri,
    title={MRI is a DNA damage response adaptor during classical non-homologous end joining},
    author={Hung, Putzer J and Johnson, Britney and Chen, Bo-Ruei and Byrum, Andrea K and Bredemeyer, Andrea L and Yewdell, William T and Johnson, Tanya E and Lee, Brian J and Deivasigamani, Shruthi and Hindi, Issa and others},
    journal={Molecular cell},
    volume={71},
    number={2},
    pages={332--342},
    year={2018},
    publisher={Elsevier}
    }
  • Zheng, J., Corzo, C., Chang, M. R., Shang, J., Lam, V. Q., Brust, R., Blayo, A., Bruning, J. B., Kamenecka, T. M., Kojetin, D. J., & others. (2018). Chemical crosslinking mass spectrometry reveals the conformational landscape of the activation helix of ppar$\gamma$; a model for ligand-dependent antagonism. Structure, 26(11), 1431–1439.
    [Bibtex]
    @article{zheng2018chemical,
    title={Chemical crosslinking mass spectrometry reveals the conformational landscape of the activation helix of PPAR$\gamma$; a model for ligand-dependent antagonism},
    author={Zheng, Jie and Corzo, Cesar and Chang, Mi Ra and Shang, Jinsai and Lam, Vinh Q and Brust, Richard and Blayo, Anne-Laure and Bruning, John B and Kamenecka, Theodore M and Kojetin, Douglas J and others},
    journal={Structure},
    volume={26},
    number={11},
    pages={1431--1439},
    year={2018},
    publisher={Elsevier}
    }
  • Fernandez, E., Kose, N., Edeling, M. A., Adhikari, J., Sapparapu, G., Lazarte, S. M., Nelson, C. A., Govero, J., Gross, M. L., Fremont, D. H., & others. (2018). Mouse and human monoclonal antibodies protect against infection by multiple genotypes of japanese encephalitis virus. Mbio, 9(1), e00008–18.
    [Bibtex]
    @article{fernandez2018mouse,
    title={Mouse and human monoclonal antibodies protect against infection by multiple genotypes of japanese encephalitis virus},
    author={Fernandez, Estefania and Kose, Nurgun and Edeling, Melissa A and Adhikari, Jagat and Sapparapu, Gopal and Lazarte, Susana M and Nelson, Christopher A and Govero, Jennifer and Gross, Michael L and Fremont, Daved H and others},
    journal={MBio},
    volume={9},
    number={1},
    pages={e00008--18},
    year={2018},
    publisher={Am Soc Microbiol}
    }
  • Bandyopadhyay, A., Van Eps, N., Eger, B. T., Rauscher, S., Yedidi, R. S., Moroni, T., West, G. M., Robinson, K. A., Griffin, P. R., Mitchell, J., & others. (2018). A novel polar core and weakly fixed c-tail in squid arrestin provide new insight into interaction with rhodopsin. Journal of molecular biology, 430(21), 4102–4118.
    [Bibtex]
    @article{bandyopadhyay2018novel,
    title={A Novel Polar Core and Weakly Fixed C-Tail in Squid Arrestin Provide New Insight into Interaction with Rhodopsin},
    author={Bandyopadhyay, Abhishek and Van Eps, Ned and Eger, Bryan T and Rauscher, Sarah and Yedidi, Ravikiran S and Moroni, Tina and West, Graham M and Robinson, Kelly Ann and Griffin, Patrick R and Mitchell, Jane and others},
    journal={Journal of molecular biology},
    volume={430},
    number={21},
    pages={4102--4118},
    year={2018},
    publisher={Elsevier}
    }
  • Offenbacher, A. R., Iavarone, A. T., & Klinman, J. P.. (2018). Hydrogen–deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase. Journal of biological chemistry, 293(4), 1138–1148.
    [Bibtex]
    @article{offenbacher2018hydrogen,
    title={Hydrogen--deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase},
    author={Offenbacher, Adam R and Iavarone, Anthony T and Klinman, Judith P},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={4},
    pages={1138--1148},
    year={2018},
    publisher={ASBMB}
    }
  • Offenbacher, A. R., Iavarone, A. T., & Klinman, J. P.. (2018). Hydrogen–deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase. Journal of biological chemistry, 293(4), 1138–1148.
    [Bibtex]
    @article{offenbacher2018hydrogen,
    title={Hydrogen--deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase},
    author={Offenbacher, Adam R and Iavarone, Anthony T and Klinman, Judith P},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={4},
    pages={1138--1148},
    year={2018},
    publisher={ASBMB}
    }
  • Fernandez, E., Kose, N., Edeling, M. A., Adhikari, J., Sapparapu, G., Lazarte, S. M., Nelson, C. A., Govero, J., Gross, M. L., Fremont, D. H., & others. (2018). Mouse and human monoclonal antibodies protect against infection by multiple genotypes of japanese encephalitis virus. Mbio, 9(1), e00008–18.
    [Bibtex]
    @article{fernandez2018mouse,
    title={Mouse and Human Monoclonal Antibodies Protect against Infection by Multiple Genotypes of Japanese Encephalitis Virus},
    author={Fernandez, Estefania and Kose, Nurgun and Edeling, Melissa A and Adhikari, Jagat and Sapparapu, Gopal and Lazarte, Susana M and Nelson, Christopher A and Govero, Jennifer and Gross, Michael L and Fremont, Daved H and others},
    journal={mBio},
    volume={9},
    number={1},
    pages={e00008--18},
    year={2018},
    publisher={Am Soc Microbiol}
    }
  • Woodcock, J. M., Goodwin, K. L., Sandow, J. J., Coolen, C., Perugini, M. A., Webb, A. I., Pitson, S. M., Lopez, A. F., & Carver, J. A.. (2018). Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, n-terminal $\alpha$-helical order, and molecular chaperone activity. Journal of biological chemistry, 293(1), 89–99.
    [Bibtex]
    @article{woodcock2018role,
    title={Role of salt bridges in the dimer interface of 14-3-3$\zeta$ in dimer dynamics, N-terminal $\alpha$-helical order, and molecular chaperone activity},
    author={Woodcock, Joanna M and Goodwin, Katy L and Sandow, Jarrod J and Coolen, Carl and Perugini, Matthew A and Webb, Andrew I and Pitson, Stuart M and Lopez, Angel F and Carver, John A},
    journal={Journal of Biological Chemistry},
    volume={293},
    number={1},
    pages={89--99},
    year={2018},
    publisher={ASBMB}
    }
  • Johnson, B., VanBlargan, L. A., Xu, W., White, J. P., Shan, C., Shi, P., Zhang, R., Adhikari, J., Gross, M. L., Leung, D. W., & others. (2018). Human ifit3 modulates ifit1 rna binding specificity and protein stability. Immunity, 48(3), 487–499.
    [Bibtex]
    @article{johnson2018human,
    title={Human IFIT3 modulates IFIT1 RNA binding specificity and protein stability},
    author={Johnson, Britney and VanBlargan, Laura A and Xu, Wei and White, James P and Shan, Chao and Shi, Pei-Yong and Zhang, Rong and Adhikari, Jagat and Gross, Michael L and Leung, Daisy W and others},
    journal={Immunity},
    volume={48},
    number={3},
    pages={487--499},
    year={2018},
    publisher={Elsevier}
    }
  • Arun, A., Narayanan, S., Sarangi, S., & Mandal, A. K.. (2018). Analysis of isotopic peaks in hydrogen/deuterium exchange mass spectra for precise measurement of isotope average centroid mass of peptides and proteins using r programming language. .
    [Bibtex]
    @article{arun2018analysis,
    title={Analysis of Isotopic Peaks in Hydrogen/Deuterium Exchange Mass Spectra for Precise Measurement of Isotope Average Centroid Mass of Peptides and Proteins Using R Programming Language},
    author={Arun, Arumugaperumal and Narayanan, Sreekala and Sarangi, Subhasis and Mandal, Amit Kumar},
    year={2018}
    }
  • Zheng, J., Wang, C., Chang, M. R., Devarkar, S. C., Schweibenz, B., Crynen, G. C., Garcia-Ordonez, R. D., Pascal, B. D., Novick, S. J., Patel, S. S., & others. (2018). Hdx-ms reveals dysregulated checkpoints that compromise discrimination against self rna during rig-i mediated autoimmunity. Nature communications, 9(1), 5366.
    [Bibtex]
    @article{zheng2018hdx,
    title={HDX-MS reveals dysregulated checkpoints that compromise discrimination against self RNA during RIG-I mediated autoimmunity},
    author={Zheng, Jie and Wang, Chen and Chang, Mi Ra and Devarkar, Swapnil C and Schweibenz, Brandon and Crynen, Gogce C and Garcia-Ordonez, Ruben D and Pascal, Bruce D and Novick, Scott J and Patel, Smita S and others},
    journal={Nature communications},
    volume={9},
    number={1},
    pages={5366},
    year={2018},
    publisher={Nature Publishing Group}
    }
  • Hamuro, Y., & Coales, S. J.. (2018). Optimization of feasibility stage for hydrogen/deuterium exchange mass spectrometry. Journal of the american society for mass spectrometry, 1–7.
    [Bibtex]
    @article{hamuro2018optimization,
    title={Optimization of Feasibility Stage for Hydrogen/Deuterium Exchange Mass Spectrometry},
    author={Hamuro, Yoshitomo and Coales, Stephen J},
    journal={Journal of The American Society for Mass Spectrometry},
    pages={1--7},
    year={2018},
    publisher={Springer}
    }
  • Chinthalapudi, K., Mandati, V., Zheng, J., Sharff, A. J., Bricogne, G., Griffin, P. R., Kissil, J., & Izard, T.. (2018). Lipid binding promotes the open conformation and tumor-suppressive activity of neurofibromin 2. Nature communications, 9(1), 1338.
    [Bibtex]
    @article{chinthalapudi2018lipid,
    title={Lipid binding promotes the open conformation and tumor-suppressive activity of neurofibromin 2},
    author={Chinthalapudi, Krishna and Mandati, Vinay and Zheng, Jie and Sharff, Andrew J and Bricogne, Gerard and Griffin, Patrick R and Kissil, Joseph and Izard, Tina},
    journal={Nature communications},
    volume={9},
    number={1},
    pages={1338},
    year={2018},
    publisher={Nature Publishing Group}
    }
  • Petrie, E., Sandow, J., Jacobsen, A., Smith, B., Griffin, M., Lucet, I., Dai, W., Young, S., Tanzer, M., Wardak, A., & others. (2018). Conformational switching of the pseudokinase domain promotes human mlkl tetramerization and cell death by necroptosis.. Nature communications, 9(1), 2422–2422.
    [Bibtex]
    @article{petrie2018conformational,
    title={Conformational switching of the pseudokinase domain promotes human MLKL tetramerization and cell death by necroptosis.},
    author={Petrie, EJ and Sandow, JJ and Jacobsen, AV and Smith, BJ and Griffin, MDW and Lucet, IS and Dai, W and Young, SN and Tanzer, MC and Wardak, A and others},
    journal={Nature communications},
    volume={9},
    number={1},
    pages={2422--2422},
    year={2018}
    }
  • Johnson, B., McConnell, P., Kozlov, A. G., Mekel, M., Lohman, T. M., Gross, M. L., Amarasinghe, G. K., & Cooper, J. A.. (2018). Allosteric coupling of carmil and v-1 binding to capping protein revealed by hydrogen-deuterium exchange. Cell reports, 23(9), 2795–2804.
    [Bibtex]
    @article{johnson2018allosteric,
    title={Allosteric Coupling of CARMIL and V-1 Binding to Capping Protein Revealed by Hydrogen-Deuterium Exchange},
    author={Johnson, Britney and McConnell, Patrick and Kozlov, Alex G and Mekel, Marlene and Lohman, Timothy M and Gross, Michael L and Amarasinghe, Gaya K and Cooper, John A},
    journal={Cell reports},
    volume={23},
    number={9},
    pages={2795--2804},
    year={2018},
    publisher={Elsevier}
    }
  • Xiao, K., Zhao, Y., Choi, M., Liu, H., Blanc, A., Qian, J., Cahill III, T. J., Li, X., Xiao, Y., Clark, L. J., & others. (2018). Revealing the architecture of protein complexes by an orthogonal approach combining hdxms, cxms, and disulfide trapping. Nature protocols, 13(6), 1403.
    [Bibtex]
    @article{xiao2018revealing,
    title={Revealing the architecture of protein complexes by an orthogonal approach combining HDXMS, CXMS, and disulfide trapping},
    author={Xiao, Kunhong and Zhao, Yang and Choi, Minjung and Liu, Hongda and Blanc, Adi and Qian, Jiang and Cahill III, Thomas J and Li, Xue and Xiao, Yunfang and Clark, Lisa J and others},
    journal={Nature protocols},
    volume={13},
    number={6},
    pages={1403},
    year={2018},
    publisher={Nature Publishing Group}
    }
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    author={Brown, Nicole E},
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    author={Yan, Yuetian and Grant, Gregory A and Gross, Michael L},
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    @article{chalmers2011methods,
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    author={Chalmers, Michael J and Pascal, Bruce D and Willis, Scooter and Zhang, Jun and Iturria, Stephen J and Dodge, Jeffery A and Griffin, Patrick R},
    journal={International journal of mass spectrometry},
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    year={2011},
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    }
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    }
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    @article{zhang2011dna,
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    journal={Expert review of proteomics},
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    }
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    }
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    }
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    @article{zhang2010hydrogen,
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